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VectorBase is a National Institute of Allergy and Infectious Diseases (NIAID) Bioinformatics Resource Center (BRC) providing genomic, phenotypic and population-centric data to the scientific community for invertebrate vectors of human pathogens.

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Genomes

Transcripts &
Transcriptomes

Proteins &
Proteomes

Mitochondrial
Sequences

Population
Biology

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A large tranche of data from Des Plaines Valley Mosquito Abatement (Illinois) surveillance data has been added for the final VectorBase release, as well as surveillance data from Maryland, Virginia, Ohio, Montana, and North Dakota. Coverage of the mainland USA is improving!

In the next year or so we will be improving entomological monitoring data from Africa, see this FAQ for more info.

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Public webinars - tool/resource specific and species/group specific sessions, each with seven and eight different events respectively (Feb 5-Sep 10)
Meetings we plan to attend: ISOPS (July 15-19) & Mosquito and other vectors (July 22-26)

For all the webinars, sign up is required but attendance is free. Follow this link to learn details about these and other events

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New variation data sets for three vectors have been added this release - Culex quinquefasciatus from the publication "Using targeted next-generation sequencing to characterize genetic differences associated with insecticide resistance in Culex quinquefasciatus populations from the southern U.S.", Kothera et al, PLoS One. 2024 Jul 3;14(7), and two sandflies - Lutzomyia longipalpis and Phlebotomus papatasi from the Sandfly Genome Consortium.

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As part of our planning for contract renewal we are discontinuing Apollo patch builds from the February 2024 release. The Apollo system will still be open to the community to make gene model edits, but these alterations will not be committed back into the VectorBase databases until Apollo has been transferred to the new contract holder. We currently anticipate that Apollo patch builds will commence from March 2024.

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The PopBio map now has visualization tools for blood meal host in the new Blood Meal view. Explore the map to see which hosts were bitten by which vectors.

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Submit your data to VectorBase

VectorBase is not just for accessing data and using tools - we encourage you to actively contribute by submitting your own data and citations to enrich the knowledge base. Follow this link for more information.

Keep up with the latest debates or join the conversation by participating in community discussions on our Facebook and Twitter.

Want to see your BLAST, ClustalW, HMMer, and Export jobs?

Popular Organisms

Aedes aegypti

Anopheles gambiae

Culex quinquefasciatus

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Leptotrombidium deliense

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Aedes albopictus

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Release VB-2024-08

September 11, 2024

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Did You Know?

Q: How does VectorBase annotate repeats and mask sequences?

It is standard practice to annotate repetitive regions of a genome as repeat features; this may be... More

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